IL_4Y4P_087

3D structure

PDB id

4Y4P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.5 Å

Loop

Sequence

CUGUGAACC*GGGGAG

Length

15 nucleotides

Bulged bases

4Y4P|1|1A|U|2154

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4Y4P|1|1A|C|2151
4Y4P|1|1A|U|2152
4Y4P|1|1A|G|2153
4Y4P|1|1A|U|2154
4Y4P|1|1A|G|2155
4Y4P|1|1A|A|2156
4Y4P|1|1A|A|2157
4Y4P|1|1A|C|2158
4Y4P|1|1A|C|2159
*
4Y4P|1|1A|G|2176
4Y4P|1|1A|G|2177
4Y4P|1|1A|G|2178
4Y4P|1|1A|G|2179
4Y4P|1|1A|A|2180
4Y4P|1|1A|G|2181

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains