IL_4YBB_171

3D structure

PDB id

4YBB (explore in PDB, NAKB, or RNA 3D Hub)

Description

High-resolution structure of the Escherichia coli ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.1 Å

Loop

Sequence

GG*UAC

Length

5 nucleotides

Bulged bases

4YBB|1|CA|A|896

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4YBB_171 not in the Motif Atlas

Geometric match to IL_5J7L_302

Geometric discrepancy: 0.3749

The information below is about IL_5J7L_302

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.7

Basepair signature

cWW-L-cWW

Number of instances in this motif group

132

Unit IDs

4YBB|1|CA|G|880
4YBB|1|CA|G|881
*
4YBB|1|CA|U|895
4YBB|1|CA|A|896
4YBB|1|CA|C|897

Current chains

Chain CA

23S rRNA

Nearby chains