IL_4YHH_024

3D structure

PDB id

4YHH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the 30S ribosomal subunit from Thermus thermophilus in complex with tigecycline

Experimental method

X-RAY DIFFRACTION

Resolution

3.42 Å

Loop

Sequence

CGUGCCAG*CGGUAAUACG

Length

18 nucleotides

Bulged bases

4YHH|1|A|A|532, 4YHH|1|A|U|534

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4YHH|1|A|C|514
4YHH|1|A|G|515
4YHH|1|A|U|516
4YHH|1|A|G|517
4YHH|1|A|C|518
4YHH|1|A|C|519
4YHH|1|A|A|520
4YHH|1|A|G|521
*
4YHH|1|A|C|528
4YHH|1|A|G|529
4YHH|1|A|G|530
4YHH|1|A|U|531
4YHH|1|A|A|532
4YHH|1|A|A|533
4YHH|1|A|U|534
4YHH|1|A|A|535
4YHH|1|A|C|536
4YHH|1|A|G|537

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain C

30S ribosomal protein S3

Chain D

30S ribosomal protein S4

Chain L

30S ribosomal protein S12