IL_4YHH_052

3D structure

PDB id

4YHH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the 30S ribosomal subunit from Thermus thermophilus in complex with tigecycline

Experimental method

X-RAY DIFFRACTION

Resolution

3.42 Å

Loop

Sequence

UUAGUUG*CACUCUAA

Length

15 nucleotides

Bulged bases

4YHH|1|A|U|1126

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4YHH|1|A|U|1121
4YHH|1|A|U|1122
4YHH|1|A|A|1123
4YHH|1|A|G|1124
4YHH|1|A|U|1125
4YHH|1|A|U|1126
4YHH|1|A|G|1127
*
4YHH|1|A|C|1145
4YHH|1|A|A|1146
4YHH|1|A|C|1147
4YHH|1|A|U|1148
4YHH|1|A|C|1149
4YHH|1|A|U|1150
4YHH|1|A|A|1151
4YHH|1|A|A|1152

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain I

30S ribosomal protein S9

Chain J

30S ribosomal protein S10

Chain N

30S ribosomal protein S14 type Z