IL_4YHH_073

3D structure

PDB id

4YHH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the 30S ribosomal subunit from Thermus thermophilus in complex with tigecycline

Experimental method

X-RAY DIFFRACTION

Resolution

3.42 Å

Loop

Sequence

GGGGACAAC*GCUAAUCCCC

Length

19 nucleotides

Bulged bases

4YHH|1|A|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4YHH|1|A|G|145
4YHH|1|A|G|146
4YHH|1|A|G|147
4YHH|1|A|G|148
4YHH|1|A|A|149
4YHH|1|A|C|150
4YHH|1|A|A|151
4YHH|1|A|A|152
4YHH|1|A|C|153
*
4YHH|1|A|G|168
4YHH|1|A|C|169
4YHH|1|A|U|170
4YHH|1|A|A|171
4YHH|1|A|A|172
4YHH|1|A|U|173
4YHH|1|A|C|174
4YHH|1|A|C|175
4YHH|1|A|C|176
4YHH|1|A|C|177

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain T

30S ribosomal protein S20