IL_4YHH_077

3D structure

PDB id

4YHH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the 30S ribosomal subunit from Thermus thermophilus in complex with tigecycline

Experimental method

X-RAY DIFFRACTION

Resolution

3.42 Å

Loop

Sequence

CGGGACG*CGGUACCG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4YHH|1|A|C|444
4YHH|1|A|G|445
4YHH|1|A|G|446
4YHH|1|A|G|447
4YHH|1|A|A|448
4YHH|1|A|C|449
4YHH|1|A|G|450
*
4YHH|1|A|C|483
4YHH|1|A|G|484
4YHH|1|A|G|485
4YHH|1|A|U|486
4YHH|1|A|A|487
4YHH|1|A|C|488
4YHH|1|A|C|489
4YHH|1|A|G|490

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain D

30S ribosomal protein S4

Chain P

30S ribosomal protein S16