IL_4YLO_016
3D structure
- PDB id
- 4YLO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli Transcription Initiation Complex - 16-bp spacer and 4-nt RNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 6 Å
Loop
- Sequence
- CAC*GTG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4YLO|1|4|DC|27
4YLO|1|4|DA|28
4YLO|1|4|DC|29
*
4YLO|1|5|DG|34
4YLO|1|5|DT|35
4YLO|1|5|DG|36
Current chains
- Chain 4
- NT strand DNA (49-MER)
- Chain 5
- T strand DNA (49-MER)
Nearby chains
- Chain I
- DNA-directed RNA polymerase subunit beta
- Chain J
- DNA-directed RNA polymerase subunit beta'
- Chain L
- RNA polymerase sigma factor RpoD
Coloring options: