IL_4YZV_150

3D structure

PDB id

4YZV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGGAG*CGCCGGUGAAAUACC

Length

20 nucleotides

Bulged bases

4YZV|1|RA|G|2166, 4YZV|1|RA|U|2167

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4YZV|1|RA|G|2123
4YZV|1|RA|G|2124
4YZV|1|RA|G|2125
4YZV|1|RA|A|2126
4YZV|1|RA|G|2127
*
4YZV|1|RA|C|2161
4YZV|1|RA|G|2162
4YZV|1|RA|C|2163
4YZV|1|RA|C|2164
4YZV|1|RA|G|2165
4YZV|1|RA|G|2166
4YZV|1|RA|U|2167
4YZV|1|RA|G|2168
4YZV|1|RA|A|2169
4YZV|1|RA|A|2170
4YZV|1|RA|A|2171
4YZV|1|RA|U|2172
4YZV|1|RA|A|2173
4YZV|1|RA|C|2174
4YZV|1|RA|C|2175

Current chains

Chain RA

23S rRNA

Nearby chains