IL_4YZV_382
3D structure
- PDB id
- 4YZV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codon
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- ACUCUG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 4YZV|1|YA|G|1992
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4YZV_382 not in the Motif Atlas
- Homologous match to IL_9DFE_067
- Geometric discrepancy: 0.0912
- The information below is about IL_9DFE_067
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28217.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 10
Unit IDs
4YZV|1|YA|A|1669
4YZV|1|YA|C|1670
4YZV|1|YA|U|1671
4YZV|1|YA|C|1672
4YZV|1|YA|U|1673
4YZV|1|YA|G|1674
*
4YZV|1|YA|C|1990
4YZV|1|YA|U|1991
4YZV|1|YA|G|1992
4YZV|1|YA|U|1993
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain YE
- 50S ribosomal protein L3
- Chain YO
- 50S ribosomal protein L14
Coloring options: