IL_4YZV_384

3D structure

PDB id

4YZV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GUUGCCAGC*GGGCACUC

Length

17 nucleotides

Bulged bases

4YZV|1|QA|U|1126

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4YZV|1|QA|G|1124
4YZV|1|QA|U|1125
4YZV|1|QA|U|1126
4YZV|1|QA|G|1127
4YZV|1|QA|C|1128
4YZV|1|QA|C|1129
4YZV|1|QA|A|1130
4YZV|1|QA|G|1131
4YZV|1|QA|C|1132
*
4YZV|1|QA|G|1142
4YZV|1|QA|G|1143
4YZV|1|QA|G|1144
4YZV|1|QA|C|1145
4YZV|1|QA|A|1146
4YZV|1|QA|C|1147
4YZV|1|QA|U|1148
4YZV|1|QA|C|1149

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QI

30S ribosomal protein S9

Chain QJ

30S ribosomal protein S10