3D structure

PDB id
4Z3S (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.65 Å

Loop

Sequence
CCCCCAAG*CG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4Z3S_035 not in the Motif Atlas
Geometric match to IL_7RQB_037
Geometric discrepancy: 0.0389
The information below is about IL_7RQB_037
Detailed Annotation
SSU/LSU pseudoknot
Broad Annotation
No text annotation
Motif group
IL_15861.7
Basepair signature
cWW-L-cWW-L-L-R-cSH
Number of instances in this motif group
12

Unit IDs

4Z3S|1|1A|C|1004
4Z3S|1|1A|C|1005
4Z3S|1|1A|C|1006
4Z3S|1|1A|C|1007
4Z3S|1|1A|C|1008
4Z3S|1|1A|A|1009
4Z3S|1|1A|A|1010
4Z3S|1|1A|G|1011
*
4Z3S|1|1A|C|1150
4Z3S|1|1A|G|1151

Current chains

Chain 1A
23S Ribosomal RNA

Nearby chains

Chain 1N
50S ribosomal protein L13
Chain 1U
50S ribosomal protein L20

Coloring options:


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