IL_4Z3S_098

3D structure

PDB id

4Z3S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.65 Å

Loop

Sequence

GAA*U(PSU)C

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4Z3S_098 not in the Motif Atlas

Homologous match to IL_7RQB_100

Geometric discrepancy: 0.0557

The information below is about IL_7RQB_100

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4Z3S|1|1A|G|2588
4Z3S|1|1A|A|2589
4Z3S|1|1A|A|2590
*
4Z3S|1|1A|U|2604
4Z3S|1|1A|PSU|2605
4Z3S|1|1A|C|2606

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 1D

50S ribosomal protein L2

Chain 1w

Transfer RNA; tRNA

Chain 1x

Transfer RNA; tRNA