IL_4Z3S_199

3D structure

PDB id

4Z3S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.65 Å

Loop

Sequence

CGC*GGAG

Length

7 nucleotides

Bulged bases

4Z3S|1|2A|G|932

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4Z3S_199 not in the Motif Atlas

Geometric match to IL_7RQB_025

Geometric discrepancy: 0.197

The information below is about IL_7RQB_025

Detailed Annotation

Intercalated cWW

Broad Annotation

Intercalated cWW

Motif group

IL_52767.4

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

28

Unit IDs

4Z3S|1|2A|C|844
4Z3S|1|2A|G|845
4Z3S|1|2A|C|846
*
4Z3S|1|2A|G|931
4Z3S|1|2A|G|932
4Z3S|1|2A|A|933
4Z3S|1|2A|G|934

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 23

50S ribosomal protein L30