IL_4Z3S_216

3D structure

PDB id

4Z3S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.65 Å

Loop

Sequence

CGAUG*UAAG

Length

9 nucleotides

Bulged bases

4Z3S|1|2A|U|1205

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4Z3S_216 not in the Motif Atlas

Homologous match to IL_7RQB_046

Geometric discrepancy: 0.1639

The information below is about IL_7RQB_046

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68574.2

Basepair signature

cWW-tHH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

4Z3S|1|2A|C|1202
4Z3S|1|2A|G|1203
4Z3S|1|2A|A|1204
4Z3S|1|2A|U|1205
4Z3S|1|2A|G|1206
*
4Z3S|1|2A|U|1240
4Z3S|1|2A|A|1241
4Z3S|1|2A|A|1242
4Z3S|1|2A|G|1243

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2F

50S ribosomal protein L4

Chain 2P

50S ribosomal protein L15