IL_4Z3S_323

3D structure

PDB id

4Z3S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.65 Å

Loop

Sequence

GGG*UU

Length

5 nucleotides

Bulged bases

4Z3S|1|2a|G|926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4Z3S_323 not in the Motif Atlas

Homologous match to IL_4LFB_036

Geometric discrepancy: 0.0795

The information below is about IL_4LFB_036

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.13

Basepair signature

cWW-L-cWW

Number of instances in this motif group

49

Unit IDs

4Z3S|1|2a|G|925
4Z3S|1|2a|G|926
4Z3S|1|2a|G|927
*
4Z3S|1|2a|U|1390
4Z3S|1|2a|U|1391

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains

Chain 2v

mRNA