IL_4Z3S_361

3D structure

PDB id

4Z3S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.65 Å

Loop

Sequence

GGAACUCUG*CUGUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4Z3S_361 not in the Motif Atlas

Homologous match to IL_9DFE_066

Geometric discrepancy: 0.0587

The information below is about IL_9DFE_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_22854.4

Basepair signature

cWW-tSH-cWW-tHW-R-L-cWW-L-L-R

Number of instances in this motif group

7

Unit IDs

4Z3S|1|2A|G|1666
4Z3S|1|2A|G|1667
4Z3S|1|2A|A|1668
4Z3S|1|2A|A|1669
4Z3S|1|2A|C|1670
4Z3S|1|2A|U|1671
4Z3S|1|2A|C|1672
4Z3S|1|2A|U|1673
4Z3S|1|2A|G|1674
*
4Z3S|1|2A|C|1990
4Z3S|1|2A|U|1991
4Z3S|1|2A|G|1992
4Z3S|1|2A|U|1993
4Z3S|1|2A|C|1994

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2E

50S ribosomal protein L3

Chain 2O

50S ribosomal protein L14