IL_4Z8C_120
3D structure
- PDB id
- 4Z8C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CUACC*GAUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4Z8C_120 not in the Motif Atlas
- Homologous match to IL_4LFB_008
- Geometric discrepancy: 0.0683
- The information below is about IL_4LFB_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_64231.5
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
4Z8C|1|1a|C|127
4Z8C|1|1a|U|128
4Z8C|1|1a|A|129
4Z8C|1|1a|C|130
4Z8C|1|1a|C|131
*
4Z8C|1|1a|G|223
4Z8C|1|1a|A|224
4Z8C|1|1a|U|225
4Z8C|1|1a|G|226
Current chains
- Chain 1a
- 16S ribosomal RNA
Nearby chains
- Chain 1p
- 30S ribosomal protein S16
- Chain 1t
- 30S ribosomal protein S20
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