IL_4Z8C_131
3D structure
- PDB id
- 4Z8C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GAAACCC*GGACUGAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4Z8C_131 not in the Motif Atlas
- Geometric match to IL_6CZR_131
- Geometric discrepancy: 0.1823
- The information below is about IL_6CZR_131
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_30149.1
- Basepair signature
- cWW-L-R-L-R-tWH-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
4Z8C|1|1a|G|445
4Z8C|1|1a|A|446
4Z8C|1|1a|A|447
4Z8C|1|1a|A|448
4Z8C|1|1a|C|449
4Z8C|1|1a|C|450
4Z8C|1|1a|C|451
*
4Z8C|1|1a|G|461
4Z8C|1|1a|G|462
4Z8C|1|1a|A|463
4Z8C|1|1a|C|464
4Z8C|1|1a|U|465
4Z8C|1|1a|G|466
4Z8C|1|1a|A|467
4Z8C|1|1a|C|468
Current chains
- Chain 1a
- 16S ribosomal RNA
Nearby chains
- Chain 1p
- 30S ribosomal protein S16
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