IL_4ZER_263

3D structure

PDB id

4ZER (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUGUGAACC*GGGGGAG

Length

16 nucleotides

Bulged bases

4ZER|1|2A|U|2132

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4ZER|1|2A|C|2129
4ZER|1|2A|U|2130
4ZER|1|2A|G|2131
4ZER|1|2A|U|2132
4ZER|1|2A|G|2133
4ZER|1|2A|A|2134
4ZER|1|2A|A|2135
4ZER|1|2A|C|2136
4ZER|1|2A|C|2137
*
4ZER|1|2A|G|2153
4ZER|1|2A|G|2154
4ZER|1|2A|G|2155
4ZER|1|2A|G|2156
4ZER|1|2A|G|2157
4ZER|1|2A|A|2158
4ZER|1|2A|G|2159

Current chains

Chain 2A

23s ribosomal RNA

Nearby chains