IL_4ZSN_278

3D structure

PDB id

4ZSN (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S-wild-type HigB toxin complex bound to a AAA lysine codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GAGUG*CUC

Length

8 nucleotides

Bulged bases

4ZSN|1|YA|A|1088

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4ZSN_278 not in the Motif Atlas

Homologous match to IL_9DFE_043

Geometric discrepancy: 0.4253

The information below is about IL_9DFE_043

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4ZSN|1|YA|G|1087
4ZSN|1|YA|A|1088
4ZSN|1|YA|G|1089
4ZSN|1|YA|U|1090
4ZSN|1|YA|G|1091
*
4ZSN|1|YA|C|1100
4ZSN|1|YA|U|1101
4ZSN|1|YA|C|1102

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y9

50S ribosomal protein L36