IL_4ZSN_302

3D structure

PDB id

4ZSN (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S-wild-type HigB toxin complex bound to a AAA lysine codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CGUAAC*GGAGAAG

Length

13 nucleotides

Bulged bases

4ZSN|1|YA|G|1699

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4ZSN_302 not in the Motif Atlas

Homologous match to IL_7RQB_068

Geometric discrepancy: 0.0602

The information below is about IL_7RQB_068

Detailed Annotation

tSH-tSH-tHH-tHS

Broad Annotation

No text annotation

Motif group

IL_65969.2

Basepair signature

cWW-tSH-tSH-tHH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

4ZSN|1|YA|C|1686
4ZSN|1|YA|G|1687
4ZSN|1|YA|U|1688
4ZSN|1|YA|A|1689
4ZSN|1|YA|A|1690
4ZSN|1|YA|C|1691
*
4ZSN|1|YA|G|1696
4ZSN|1|YA|G|1697
4ZSN|1|YA|A|1698
4ZSN|1|YA|G|1699
4ZSN|1|YA|A|1700
4ZSN|1|YA|A|1701
4ZSN|1|YA|G|1702

Current chains

Chain YA

23S rRNA

Nearby chains

Chain XA

Small subunit ribosomal RNA; SSU rRNA

Chain YD

50S ribosomal protein L2