IL_5AA0_164
3D structure
- PDB id
- 5AA0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of Thermous thermophilus ribosome (A-and P-site tRNA) bound to BipA-GDPCP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- GCC*GGC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: GCC,GGC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5AA0_164 not in the Motif Atlas
- Homologous match to IL_5EL4_357
- Geometric discrepancy: 0.2658
- The information below is about IL_5EL4_357
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5AA0|1|BC|G|1||||P_1
5AA0|1|BC|C|2||||P_1
5AA0|1|BC|C|3||||P_1
*
5AA0|1|BC|G|70||||P_1
5AA0|1|BC|G|71||||P_1
5AA0|1|BC|C|72||||P_1
Current chains
- Chain BC
- tRNA chain 1
Nearby chains
- Chain AA
- Large subunit ribosomal RNA; LSU rRNA
- Chain Aa
- 50S ribosomal protein L31
- Chain Ac
- 50S ribosomal protein L33
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