IL_5AA0_173
3D structure
- PDB id
- 5AA0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of Thermous thermophilus ribosome (A-and P-site tRNA) bound to BipA-GDPCP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- CGCCGCGAAGACAGCCA*UGGUCGAGUGGCG
- Length
- 30 nucleotides
- Bulged bases
- 5AA0|1|AA|G|1039||||P_1, 5AA0|1|AA|C|1043||||P_1, 5AA0|1|AA|G|1044||||P_1, 5AA0|1|AA|A|1045||||P_1, 5AA0|1|AA|A|1046||||P_1, 5AA0|1|AA|A|1050||||P_1
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5AA0|1|AA|C|1038||||P_1
5AA0|1|AA|G|1039||||P_1
5AA0|1|AA|C|1040||||P_1
5AA0|1|AA|C|1041||||P_1
5AA0|1|AA|G|1042||||P_1
5AA0|1|AA|C|1043||||P_1
5AA0|1|AA|G|1044||||P_1
5AA0|1|AA|A|1045||||P_1
5AA0|1|AA|A|1046||||P_1
5AA0|1|AA|G|1047||||P_1
5AA0|1|AA|A|1048||||P_1
5AA0|1|AA|C|1049||||P_1
5AA0|1|AA|A|1050||||P_1
5AA0|1|AA|G|1051||||P_1
5AA0|1|AA|C|1052||||P_1
5AA0|1|AA|C|1053||||P_1
5AA0|1|AA|A|1054||||P_1
*
5AA0|1|AA|U|1105||||P_1
5AA0|1|AA|G|1106||||P_1
5AA0|1|AA|G|1107||||P_1
5AA0|1|AA|U|1108||||P_1
5AA0|1|AA|C|1109||||P_1
5AA0|1|AA|G|1110||||P_1
5AA0|1|AA|A|1111||||P_1
5AA0|1|AA|G|1112||||P_1
5AA0|1|AA|U|1113||||P_1
5AA0|1|AA|G|1114||||P_1
5AA0|1|AA|G|1115||||P_1
5AA0|1|AA|C|1116||||P_1
5AA0|1|AA|G|1117||||P_1
Current chains
- Chain AA
- 23S ribosomal RNA
Nearby chains
- Chain AH
- 50S ribosomal protein L6
- Chain AI
- 50S ribosomal protein L10
- Chain AN
- 50S ribosomal protein L16
- Chain AW
- 50S ribosomal protein L25
- Chain Af
- 50S ribosomal protein L36
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