IL_5ADY_050
3D structure
- PDB id
- 5ADY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with HflX
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- CGUU*AAGUG
- Length
- 9 nucleotides
- Bulged bases
- 5ADY|1|B|G|1248
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5ADY_050 not in the Motif Atlas
- Geometric match to IL_4V88_429
- Geometric discrepancy: 0.3105
- The information below is about IL_4V88_429
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_30621.4
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 66
Unit IDs
5ADY|1|B|C|1196
5ADY|1|B|G|1197
5ADY|1|B|U|1198
5ADY|1|B|U|1199
*
5ADY|1|B|A|1246
5ADY|1|B|A|1247
5ADY|1|B|G|1248
5ADY|1|B|U|1249
5ADY|1|B|G|1250
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain E
- 50S RIBOSOMAL PROTEIN L4
- Chain L
- 50S RIBOSOMAL PROTEIN L15
- Chain Q
- 50S RIBOSOMAL PROTEIN L20
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