IL_5ADY_074
3D structure
- PDB id
- 5ADY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with HflX
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- GGAACUAGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5ADY_074 not in the Motif Atlas
- Homologous match to IL_4WF9_117
- Geometric discrepancy: 0.1782
- The information below is about IL_4WF9_117
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80252.1
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 10
Unit IDs
5ADY|1|B|G|1666
5ADY|1|B|G|1667
5ADY|1|B|A|1668
5ADY|1|B|A|1669
5ADY|1|B|C|1670
5ADY|1|B|U|1671
5ADY|1|B|A|1672
5ADY|1|B|G|1673
5ADY|1|B|G|1674
*
5ADY|1|B|C|1990
5ADY|1|B|U|1991
5ADY|1|B|G|1992
5ADY|1|B|U|1993
5ADY|1|B|C|1994
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain D
- 50S RIBOSOMAL PROTEIN L3
- Chain K
- 50S RIBOSOMAL PROTEIN L14
Coloring options: