IL_5ADY_106
3D structure
- PDB id
- 5ADY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with HflX
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- CGAG*CGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5ADY_106 not in the Motif Atlas
- Geometric match to IL_5J7L_333
- Geometric discrepancy: 0.1939
- The information below is about IL_5J7L_333
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.15
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 34
Unit IDs
5ADY|1|B|C|2350
5ADY|1|B|G|2351
5ADY|1|B|A|2352
5ADY|1|B|G|2353
*
5ADY|1|B|C|2364
5ADY|1|B|G|2365
5ADY|1|B|A|2366
5ADY|1|B|G|2367
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain 3
- 50S RIBOSOMAL PROTEIN L35
- Chain W
- 50S RIBOSOMAL PROTEIN L27
Coloring options: