IL_5ADY_112

3D structure

PDB id

5ADY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of the 50S ribosome subunit bound with HflX

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

GCUCAU*GUACGCGAGC

Length

16 nucleotides

Bulged bases

5ADY|1|B|A|2572, 5ADY|1|B|C|2573, 5ADY|1|B|A|2577

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ADY|1|B|G|2509
5ADY|1|B|C|2510
5ADY|1|B|U|2511
5ADY|1|B|C|2512
5ADY|1|B|A|2513
5ADY|1|B|U|2514
*
5ADY|1|B|G|2570
5ADY|1|B|U|2571
5ADY|1|B|A|2572
5ADY|1|B|C|2573
5ADY|1|B|G|2574
5ADY|1|B|C|2575
5ADY|1|B|G|2576
5ADY|1|B|A|2577
5ADY|1|B|G|2578
5ADY|1|B|C|2579

Current chains

Chain B

23S RRNA

Nearby chains

Chain 0

50S RIBOSOMAL PROTEIN L32

Chain 6

GTPASE HFLX

Chain D

50S RIBOSOMAL PROTEIN L3

Chain J

50S RIBOSOMAL PROTEIN L13