IL_5ADY_118
3D structure
- PDB id
- 5ADY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with HflX
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- CUAGUAC*GGACCG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5ADY_118 not in the Motif Atlas
- Homologous match to IL_9DFE_102
- Geometric discrepancy: 0.2637
- The information below is about IL_9DFE_102
- Detailed Annotation
- Sarcin-Ricin target in LSU H95; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_16458.6
- Basepair signature
- cWW-L-R-L-R-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
5ADY|1|B|C|2652
5ADY|1|B|U|2653
5ADY|1|B|A|2654
5ADY|1|B|G|2655
5ADY|1|B|U|2656
5ADY|1|B|A|2657
5ADY|1|B|C|2658
*
5ADY|1|B|G|2663
5ADY|1|B|G|2664
5ADY|1|B|A|2665
5ADY|1|B|C|2666
5ADY|1|B|C|2667
5ADY|1|B|G|2668
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain 6
- GTPASE HFLX
- Chain G
- 50S RIBOSOMAL PROTEIN L6
Coloring options: