IL_5ADY_131

3D structure

PDB id

5ADY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of the 50S ribosome subunit bound with HflX

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

CGAUGGUAGU*GCGAGAGUAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ADY|1|A|C|71
5ADY|1|A|G|72
5ADY|1|A|A|73
5ADY|1|A|U|74
5ADY|1|A|G|75
5ADY|1|A|G|76
5ADY|1|A|U|77
5ADY|1|A|A|78
5ADY|1|A|G|79
5ADY|1|A|U|80
*
5ADY|1|A|G|96
5ADY|1|A|C|97
5ADY|1|A|G|98
5ADY|1|A|A|99
5ADY|1|A|G|100
5ADY|1|A|A|101
5ADY|1|A|G|102
5ADY|1|A|U|103
5ADY|1|A|A|104
5ADY|1|A|G|105

Current chains

Chain A

5S RRNA

Nearby chains

Chain B

Large subunit ribosomal RNA; LSU rRNA

Chain M

50S RIBOSOMAL PROTEIN L16

Chain V

50S RIBOSOMAL PROTEIN L25

Chain Z

50S RIBOSOMAL PROTEIN L30