IL_5ADY_161
3D structure
- PDB id
- 5ADY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with HflX
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- GGUUCU*GGGCC
- Length
- 11 nucleotides
- Bulged bases
- 5ADY|1|B|U|2402
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5ADY_161 not in the Motif Atlas
- Geometric match to IL_8SP9_002
- Geometric discrepancy: 0.345
- The information below is about IL_8SP9_002
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71154.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 17
Unit IDs
5ADY|1|B|G|2399
5ADY|1|B|G|2400
5ADY|1|B|U|2401
5ADY|1|B|U|2402
5ADY|1|B|C|2403
5ADY|1|B|U|2404
*
5ADY|1|B|G|2413
5ADY|1|B|G|2414
5ADY|1|B|G|2415
5ADY|1|B|C|2416
5ADY|1|B|C|2417
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain 1
- 50S RIBOSOMAL PROTEIN L33
- Chain 3
- 50S RIBOSOMAL PROTEIN L35
- Chain L
- 50S RIBOSOMAL PROTEIN L15
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