IL_5AFI_212
3D structure
- PDB id
- 5AFI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGAUGUGUAGGAUAGGUGGGAGGCUUUGAAGU*AUGGAGCCGACCUUGAAAUACCACCCUUUA
- Length
- 62 nucleotides
- Bulged bases
- 5AFI|1|A|U|2111||||P_1, 5AFI|1|A|U|2118||||P_1, 5AFI|1|A|G|2125||||P_1, 5AFI|1|A|U|2132||||P_1, 5AFI|1|A|U|2172||||P_1
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5AFI|1|A|U|2106||||P_1
5AFI|1|A|G|2107||||P_1
5AFI|1|A|A|2108||||P_1
5AFI|1|A|U|2109||||P_1
5AFI|1|A|G|2110||||P_1
5AFI|1|A|U|2111||||P_1
5AFI|1|A|G|2112||||P_1
5AFI|1|A|U|2113||||P_1
5AFI|1|A|A|2114||||P_1
5AFI|1|A|G|2115||||P_1
5AFI|1|A|G|2116||||P_1
5AFI|1|A|A|2117||||P_1
5AFI|1|A|U|2118||||P_1
5AFI|1|A|A|2119||||P_1
5AFI|1|A|G|2120||||P_1
5AFI|1|A|G|2121||||P_1
5AFI|1|A|U|2122||||P_1
5AFI|1|A|G|2123||||P_1
5AFI|1|A|G|2124||||P_1
5AFI|1|A|G|2125||||P_1
5AFI|1|A|A|2126||||P_1
5AFI|1|A|G|2127||||P_1
5AFI|1|A|G|2128||||P_1
5AFI|1|A|C|2129||||P_1
5AFI|1|A|U|2130||||P_1
5AFI|1|A|U|2131||||P_1
5AFI|1|A|U|2132||||P_1
5AFI|1|A|G|2133||||P_1
5AFI|1|A|A|2134||||P_1
5AFI|1|A|A|2135||||P_1
5AFI|1|A|G|2136||||P_1
5AFI|1|A|U|2137||||P_1
*
5AFI|1|A|A|2154||||P_1
5AFI|1|A|U|2155||||P_1
5AFI|1|A|G|2156||||P_1
5AFI|1|A|G|2157||||P_1
5AFI|1|A|A|2158||||P_1
5AFI|1|A|G|2159||||P_1
5AFI|1|A|C|2160||||P_1
5AFI|1|A|C|2161||||P_1
5AFI|1|A|G|2162||||P_1
5AFI|1|A|A|2163||||P_1
5AFI|1|A|C|2164||||P_1
5AFI|1|A|C|2165||||P_1
5AFI|1|A|U|2166||||P_1
5AFI|1|A|U|2167||||P_1
5AFI|1|A|G|2168||||P_1
5AFI|1|A|A|2169||||P_1
5AFI|1|A|A|2170||||P_1
5AFI|1|A|A|2171||||P_1
5AFI|1|A|U|2172||||P_1
5AFI|1|A|A|2173||||P_1
5AFI|1|A|C|2174||||P_1
5AFI|1|A|C|2175||||P_1
5AFI|1|A|A|2176||||P_1
5AFI|1|A|C|2177||||P_1
5AFI|1|A|C|2178||||P_1
5AFI|1|A|C|2179||||P_1
5AFI|1|A|U|2180||||P_1
5AFI|1|A|U|2181||||P_1
5AFI|1|A|U|2182||||P_1
5AFI|1|A|A|2183||||P_1
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain w
- Transfer RNA; tRNA
Coloring options: