IL_5AJ3_026

3D structure

PDB id

5AJ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the small subunit of the mammalian mitoribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

ACAUC*GCCAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_53699.1

Basepair signature

cWW-tHW-L-L-L-cSW-R-cWW

Number of instances in this motif group

2

Unit IDs

5AJ3|1|A|A|537
5AJ3|1|A|C|538
5AJ3|1|A|A|539
5AJ3|1|A|U|540
5AJ3|1|A|C|541
*
5AJ3|1|A|G|824
5AJ3|1|A|C|825
5AJ3|1|A|C|826
5AJ3|1|A|A|827
5AJ3|1|A|U|828

Current chains

Chain A

MITORIBOSOMAL 12S RRNA

Nearby chains

Chain G

MITORIBOSOMAL PROTEIN US7M, MRPS7

Chain I

MITORIBOSOMAL PROTEIN US9M, MRPS9

Chain X

MRNA

Chain m

MITORIBOSOMAL PROTEIN MS37, MRPS37