IL_5AJ3_034
3D structure
- PDB id
- 5AJ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the small subunit of the mammalian mitoribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CC*GAACAAUAG
- Length
- 11 nucleotides
- Bulged bases
- 5AJ3|1|A|A|647
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_79966.1
- Basepair signature
- cWW-tSS-R-R-R-R-R-cWW
- Number of instances in this motif group
- 1
Unit IDs
5AJ3|1|A|C|633
5AJ3|1|A|C|634
*
5AJ3|1|A|G|643
5AJ3|1|A|A|644
5AJ3|1|A|A|645
5AJ3|1|A|C|646
5AJ3|1|A|A|647
5AJ3|1|A|A|648
5AJ3|1|A|U|649
5AJ3|1|A|A|650
5AJ3|1|A|G|651
Current chains
- Chain A
- MITORIBOSOMAL 12S RRNA
Nearby chains
- Chain B
- MITORIBOSOMAL PROTEIN US2M, MRPS2
- Chain E
- MITORIBOSOMAL PROTEIN US5M, MRPS5
- Chain F
- MITORIBOSOMAL PROTEIN BS6M, MRPS6
- Chain I
- MITORIBOSOMAL PROTEIN US9M, MRPS9
- Chain U
- MITORIBOSOMAL PROTEIN BS21M, MRPS21
- Chain b
- MITORIBOSOMAL PROTEIN MS23, MRPS23
- Chain m
- MITORIBOSOMAL PROTEIN MS37, MRPS37
Coloring options: