IL_5AJ3_044

3D structure

PDB id

5AJ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the small subunit of the mammalian mitoribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UAAAAAU*AUUCAA

Length

13 nucleotides

Bulged bases

5AJ3|1|A|A|877

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_81615.1

Basepair signature

cWW-L-R-R-L-cWW-cWW-cWW

Number of instances in this motif group

1

Unit IDs

5AJ3|1|A|U|874
5AJ3|1|A|A|875
5AJ3|1|A|A|876
5AJ3|1|A|A|877
5AJ3|1|A|A|878
5AJ3|1|A|A|879
5AJ3|1|A|U|880
*
5AJ3|1|A|A|888
5AJ3|1|A|U|889
5AJ3|1|A|U|890
5AJ3|1|A|C|891
5AJ3|1|A|A|892
5AJ3|1|A|A|893

Current chains

Chain A

MITORIBOSOMAL 12S RRNA

Nearby chains

Chain O

MITORIBOSOMAL PROTEIN US15M, MRPS15

Chain e

MITORIBOSOMAL PROTEIN MS27, MRPS27

Chain j

MITORIBOSOMAL PROTEIN MS34, MRPS34