IL_5AJ3_046
3D structure
- PDB id
- 5AJ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the small subunit of the mammalian mitoribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GAAAAAAAAUCACAAU*AAUAAUCC
- Length
- 24 nucleotides
- Bulged bases
- 5AJ3|1|A|A|317, 5AJ3|1|A|A|319, 5AJ3|1|A|U|394
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5AJ3|1|A|G|306
5AJ3|1|A|A|307
5AJ3|1|A|A|308
5AJ3|1|A|A|309
5AJ3|1|A|A|310
5AJ3|1|A|A|311
5AJ3|1|A|A|312
5AJ3|1|A|A|313
5AJ3|1|A|A|314
5AJ3|1|A|U|315
5AJ3|1|A|C|316
5AJ3|1|A|A|317
5AJ3|1|A|C|318
5AJ3|1|A|A|319
5AJ3|1|A|A|320
5AJ3|1|A|U|321
*
5AJ3|1|A|A|389
5AJ3|1|A|A|390
5AJ3|1|A|U|391
5AJ3|1|A|A|392
5AJ3|1|A|A|393
5AJ3|1|A|U|394
5AJ3|1|A|C|395
5AJ3|1|A|C|396
Current chains
- Chain A
- MITORIBOSOMAL 12S RRNA
Nearby chains
- Chain F
- MITORIBOSOMAL PROTEIN BS6M, MRPS6
- Chain L
- MITORIBOSOMAL PROTEIN US12M, MRPS12
- Chain O
- MITORIBOSOMAL PROTEIN US15M, MRPS15
- Chain Q
- MITORIBOSOMAL PROTEIN US17M, MRPS17
- Chain R
- MITORIBOSOMAL PROTEIN BS18M, MRPS18C
- Chain c
- MITORIBOSOMAL PROTEIN MS25, MRPS25
- Chain m
- MITORIBOSOMAL PROTEIN MS37, MRPS37
Coloring options: