IL_5AJ3_047
3D structure
- PDB id
- 5AJ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the small subunit of the mammalian mitoribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CUUGCCAAUUCAG*CUUAUG
- Length
- 19 nucleotides
- Bulged bases
- 5AJ3|1|A|C|599, 5AJ3|1|A|C|600, 5AJ3|1|A|U|604, 5AJ3|1|A|U|697, 5AJ3|1|A|U|699
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5AJ3|1|A|C|595
5AJ3|1|A|U|596
5AJ3|1|A|U|597
5AJ3|1|A|G|598
5AJ3|1|A|C|599
5AJ3|1|A|C|600
5AJ3|1|A|A|601
5AJ3|1|A|A|602
5AJ3|1|A|U|603
5AJ3|1|A|U|604
5AJ3|1|A|C|605
5AJ3|1|A|A|606
5AJ3|1|A|G|607
*
5AJ3|1|A|C|695
5AJ3|1|A|U|696
5AJ3|1|A|U|697
5AJ3|1|A|A|698
5AJ3|1|A|U|699
5AJ3|1|A|G|700
Current chains
- Chain A
- MITORIBOSOMAL 12S RRNA
Nearby chains
- Chain E
- MITORIBOSOMAL PROTEIN US5M, MRPS5
- Chain N
- MITORIBOSOMAL PROTEIN US14M, MRPS14
- Chain i
- MITORIBOSOMAL PROTEIN MS33, MRPS33
- Chain o
- MITORIBOSOMAL PROTEIN MS39, MRPS39
Coloring options: