IL_5AJ4_018

3D structure

PDB id

5AJ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 55S mammalian mitoribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UAAAUUAU*AAAAUAAA

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5AJ4|1|AA|U|327
5AJ4|1|AA|A|328
5AJ4|1|AA|A|329
5AJ4|1|AA|A|330
5AJ4|1|AA|U|331
5AJ4|1|AA|U|332
5AJ4|1|AA|A|333
5AJ4|1|AA|U|334
*
5AJ4|1|AA|A|360
5AJ4|1|AA|A|361
5AJ4|1|AA|A|362
5AJ4|1|AA|A|363
5AJ4|1|AA|U|364
5AJ4|1|AA|A|365
5AJ4|1|AA|A|366
5AJ4|1|AA|A|367

Current chains

Chain AA

MITORIBOSOMAL 12S Ribosomal RNA

Nearby chains

Chain AF

MITORIBOSOMAL PROTEIN BS6M, MRPS6

Chain AK

MITORIBOSOMAL PROTEIN US11M, MRPS11

Chain AR

MITORIBOSOMAL PROTEIN BS18M, MRPS18C

Chain AU

MITORIBOSOMAL PROTEIN BS21M, MRPS21

Chain BD

MITORIBOSOMAL PROTEIN UL2M, MRPL2