IL_5AJ4_019

3D structure

PDB id

5AJ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 55S mammalian mitoribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

AAG*CCCU

Length

7 nucleotides

Bulged bases

5AJ4|1|AA|C|354

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5AJ4|1|AA|A|339
5AJ4|1|AA|A|340
5AJ4|1|AA|G|341
*
5AJ4|1|AA|C|352
5AJ4|1|AA|C|353
5AJ4|1|AA|C|354
5AJ4|1|AA|U|355

Current chains

Chain AA

MITORIBOSOMAL 12S Ribosomal RNA

Nearby chains

Chain AK

MITORIBOSOMAL PROTEIN US11M, MRPS11

Chain BA

Large subunit ribosomal RNA; LSU rRNA