IL_5AJ4_026

3D structure

PDB id

5AJ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 55S mammalian mitoribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

ACAUC*GCCAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5AJ4|1|AA|A|537
5AJ4|1|AA|C|538
5AJ4|1|AA|A|539
5AJ4|1|AA|U|540
5AJ4|1|AA|C|541
*
5AJ4|1|AA|G|824
5AJ4|1|AA|C|825
5AJ4|1|AA|C|826
5AJ4|1|AA|A|827
5AJ4|1|AA|U|828

Current chains

Chain AA

MITORIBOSOMAL 12S Ribosomal RNA

Nearby chains

Chain AG

MITORIBOSOMAL PROTEIN US7M, MRPS7

Chain AI

MITORIBOSOMAL PROTEIN US9M, MRPS9

Chain AX

MRNA

Chain Am

MITORIBOSOMAL PROTEIN MS37, MRPS37