IL_5AJ4_035

3D structure

PDB id

5AJ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 55S mammalian mitoribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CGAAAG*CCAAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5AJ4|1|AA|C|749
5AJ4|1|AA|G|750
5AJ4|1|AA|A|751
5AJ4|1|AA|A|752
5AJ4|1|AA|A|753
5AJ4|1|AA|G|754
*
5AJ4|1|AA|C|773
5AJ4|1|AA|C|774
5AJ4|1|AA|A|775
5AJ4|1|AA|A|776
5AJ4|1|AA|A|777
5AJ4|1|AA|G|778

Current chains

Chain AA

MITORIBOSOMAL 12S Ribosomal RNA

Nearby chains

Chain AG

MITORIBOSOMAL PROTEIN US7M, MRPS7

Chain Ag

MITORIBOSOMAL PROTEIN MS29, MRPS29

Chain Bk

MITORIBOSOMAL PROTEIN ML48, MRPL48