IL_5AJ4_046
3D structure
- PDB id
- 5AJ4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 55S mammalian mitoribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CU*ACG
- Length
- 5 nucleotides
- Bulged bases
- 5AJ4|1|BA|C|104
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5AJ4_046 not in the Motif Atlas
- Geometric match to IL_7KGA_004
- Geometric discrepancy: 0.3585
- The information below is about IL_7KGA_004
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_05642.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 67
Unit IDs
5AJ4|1|BA|C|12
5AJ4|1|BA|U|13
*
5AJ4|1|BA|A|103
5AJ4|1|BA|C|104
5AJ4|1|BA|G|105
Current chains
- Chain BA
- MITORIBOSOMAL 16S Ribosomal RNA
Nearby chains
- Chain B1
- MITORIBOSOMAL PROTEIN BL28M, MRPL28
- Chain B2
- MITORIBOSOMAL PROTEIN UL29M, MRPL47
- Chain BF
- MITORIBOSOMAL PROTEIN UL4M, MRPL4
- Chain BU
- MITORIBOSOMAL PROTEIN BL20M, MRPL20
- Chain Bh
- MITORIBOSOMAL PROTEIN ML44, MRPL44
- Chain Bn
- MITORIBOSOMAL PROTEIN ML51, MRPL51
Coloring options: