IL_5AJ4_047
3D structure
- PDB id
- 5AJ4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 55S mammalian mitoribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CAACAACAAAUACAAAAAUACACCAAAAUAAAAUAAAACAUUCACCUAACA*UUAUCCUG
- Length
- 59 nucleotides
- Bulged bases
- 5AJ4|1|BA|A|31, 5AJ4|1|BA|A|33, 5AJ4|1|BA|A|39, 5AJ4|1|BA|C|40, 5AJ4|1|BA|A|41, 5AJ4|1|BA|U|48, 5AJ4|1|BA|A|56, 5AJ4|1|BA|U|96, 5AJ4|1|BA|U|101
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5AJ4|1|BA|C|14
5AJ4|1|BA|A|15
5AJ4|1|BA|A|16
5AJ4|1|BA|C|17
5AJ4|1|BA|A|18
5AJ4|1|BA|A|25
5AJ4|1|BA|C|26
5AJ4|1|BA|A|27
5AJ4|1|BA|A|28
5AJ4|1|BA|A|29
5AJ4|1|BA|U|30
5AJ4|1|BA|A|31
5AJ4|1|BA|C|32
5AJ4|1|BA|A|33
5AJ4|1|BA|A|34
5AJ4|1|BA|A|35
5AJ4|1|BA|A|36
5AJ4|1|BA|A|37
5AJ4|1|BA|U|38
5AJ4|1|BA|A|39
5AJ4|1|BA|C|40
5AJ4|1|BA|A|41
5AJ4|1|BA|C|42
5AJ4|1|BA|C|43
5AJ4|1|BA|A|44
5AJ4|1|BA|A|45
5AJ4|1|BA|A|46
5AJ4|1|BA|A|47
5AJ4|1|BA|U|48
5AJ4|1|BA|A|49
5AJ4|1|BA|A|50
5AJ4|1|BA|A|51
5AJ4|1|BA|A|52
5AJ4|1|BA|U|53
5AJ4|1|BA|A|54
5AJ4|1|BA|A|55
5AJ4|1|BA|A|56
5AJ4|1|BA|A|57
5AJ4|1|BA|C|58
5AJ4|1|BA|A|59
5AJ4|1|BA|U|60
5AJ4|1|BA|U|61
5AJ4|1|BA|C|62
5AJ4|1|BA|A|63
5AJ4|1|BA|C|64
5AJ4|1|BA|C|65
5AJ4|1|BA|U|66
5AJ4|1|BA|A|67
5AJ4|1|BA|A|68
5AJ4|1|BA|C|69
5AJ4|1|BA|A|70
*
5AJ4|1|BA|U|95
5AJ4|1|BA|U|96
5AJ4|1|BA|A|97
5AJ4|1|BA|U|98
5AJ4|1|BA|C|99
5AJ4|1|BA|C|100
5AJ4|1|BA|U|101
5AJ4|1|BA|G|102
Current chains
- Chain BA
- MITORIBOSOMAL 16S Ribosomal RNA
Nearby chains
- Chain B1
- MITORIBOSOMAL PROTEIN BL28M, MRPL28
- Chain B2
- MITORIBOSOMAL PROTEIN UL29M, MRPL47
- Chain B7
- MITORIBOSOMAL PROTEIN BL34M, MRPL34
- Chain B8
- MITORIBOSOMAL PROTEIN BL35M, MRPL35
- Chain BF
- MITORIBOSOMAL PROTEIN UL4M, MRPL4
- Chain BI
- MITORIBOSOMAL PROTEIN BL9M, MRPL9
- Chain BP
- MITORIBOSOMAL PROTEIN UL15M, MRPL15
- Chain BX
- MITORIBOSOMAL PROTEIN UL23M, MRPL23
- Chain Ba
- MITORIBOSOMAL PROTEIN ML37, MRPL37
- Chain Be
- MITORIBOSOMAL PROTEIN ML41, MRPL41
- Chain Bn
- MITORIBOSOMAL PROTEIN ML51, MRPL51
- Chain Bv
- MITORIBOSOMAL PROTEIN ML64, MRPL59
Coloring options: