IL_5AJ4_052

3D structure

PDB id

5AJ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 55S mammalian mitoribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CAAA*UUUAG

Length

9 nucleotides

Bulged bases

5AJ4|1|BA|U|227

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5AJ4|1|BA|C|215
5AJ4|1|BA|A|216
5AJ4|1|BA|A|217
5AJ4|1|BA|A|218
*
5AJ4|1|BA|U|225
5AJ4|1|BA|U|226
5AJ4|1|BA|U|227
5AJ4|1|BA|A|228
5AJ4|1|BA|G|229

Current chains

Chain BA

MITORIBOSOMAL 16S Ribosomal RNA

Nearby chains

Chain B8

MITORIBOSOMAL PROTEIN BL35M, MRPL35

Chain BF

MITORIBOSOMAL PROTEIN UL4M, MRPL4

Chain BP

MITORIBOSOMAL PROTEIN UL15M, MRPL15

Chain Bb

MITORIBOSOMAL PROTEIN ML38, MRPL38

Chain Bl

MITORIBOSOMAL PROTEIN ML49, MRPL49