IL_5AJ4_060

3D structure

PDB id

5AJ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 55S mammalian mitoribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CCCCAAA*UCCAAUG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5AJ4|1|BA|C|393
5AJ4|1|BA|C|394
5AJ4|1|BA|C|395
5AJ4|1|BA|C|396
5AJ4|1|BA|A|397
5AJ4|1|BA|A|398
5AJ4|1|BA|A|399
*
5AJ4|1|BA|U|410
5AJ4|1|BA|C|411
5AJ4|1|BA|C|412
5AJ4|1|BA|A|413
5AJ4|1|BA|A|414
5AJ4|1|BA|U|415
5AJ4|1|BA|G|416

Current chains

Chain BA

MITORIBOSOMAL 16S Ribosomal RNA

Nearby chains

Chain B0

MITORIBOSOMAL PROTEIN BL27M, MRPL27

Chain B3

MITORIBOSOMAL PROTEIN UL30M, MRPL30

Chain Bb

MITORIBOSOMAL PROTEIN ML38, MRPL38

Chain Bk

MITORIBOSOMAL PROTEIN ML48, MRPL48

Chain Bo

MITORIBOSOMAL PROTEIN ML52, MRPL52

Chain Bt

MITORIBOSOMAL PROTEIN ML63, MRPL57