IL_5AJ4_064
3D structure
- PDB id
- 5AJ4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 55S mammalian mitoribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GAAA*UC
- Length
- 6 nucleotides
- Bulged bases
- 5AJ4|1|BA|A|530
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5AJ4_064 not in the Motif Atlas
- Homologous match to IL_6PRV_002
- Geometric discrepancy: 0.1495
- The information below is about IL_6PRV_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5AJ4|1|BA|G|529
5AJ4|1|BA|A|530
5AJ4|1|BA|A|531
5AJ4|1|BA|A|532
*
5AJ4|1|BA|U|543
5AJ4|1|BA|C|544
Current chains
- Chain BA
- MITORIBOSOMAL 16S Ribosomal RNA
Nearby chains
- Chain B9
- MITORIBOSOMAL PROTEIN BL36M, MRPL36
- Chain BK
- MITORIBOSOMAL PROTEIN UL11M, MRPL11
- Chain Bp
- MITORIBOSOMAL PROTEIN ML53, MRPL53
- Chain Bq
- MITORIBOSOMAL PROTEIN ML54, MRPL54
Coloring options: