IL_5AJ4_068

3D structure

PDB id

5AJ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 55S mammalian mitoribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

ACCA*UAAUUACAU

Length

13 nucleotides

Bulged bases

5AJ4|1|BA|A|743, 5AJ4|1|BA|U|744, 5AJ4|1|BA|U|745

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5AJ4|1|BA|A|708
5AJ4|1|BA|C|709
5AJ4|1|BA|C|710
5AJ4|1|BA|A|711
*
5AJ4|1|BA|U|741
5AJ4|1|BA|A|742
5AJ4|1|BA|A|743
5AJ4|1|BA|U|744
5AJ4|1|BA|U|745
5AJ4|1|BA|A|746
5AJ4|1|BA|C|747
5AJ4|1|BA|A|748
5AJ4|1|BA|U|749

Current chains

Chain BA

MITORIBOSOMAL 16S Ribosomal RNA

Nearby chains

Chain BX

MITORIBOSOMAL PROTEIN UL23M, MRPL23

Chain Ba

MITORIBOSOMAL PROTEIN ML37, MRPL37

Chain Be

MITORIBOSOMAL PROTEIN ML41, MRPL41

Chain Bw

MITORIBOSOMAL PROTEIN ML65, MRPS30