IL_5AJ4_087

3D structure

PDB id

5AJ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 55S mammalian mitoribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

AAA*UAACAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5AJ4|1|BA|A|1083
5AJ4|1|BA|A|1084
5AJ4|1|BA|A|1085
*
5AJ4|1|BA|U|1124
5AJ4|1|BA|A|1125
5AJ4|1|BA|A|1126
5AJ4|1|BA|C|1127
5AJ4|1|BA|A|1128
5AJ4|1|BA|U|1129

Current chains

Chain BA

MITORIBOSOMAL 16S Ribosomal RNA

Nearby chains

Chain B1

MITORIBOSOMAL PROTEIN BL28M, MRPL28

Chain BD

MITORIBOSOMAL PROTEIN UL2M, MRPL2

Chain BI

MITORIBOSOMAL PROTEIN BL9M, MRPL9