IL_5AJ4_106
3D structure
- PDB id
- 5AJ4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 55S mammalian mitoribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GAAAAAAAAUCACAAU*AAUAAUCC
- Length
- 24 nucleotides
- Bulged bases
- 5AJ4|1|AA|A|317, 5AJ4|1|AA|A|319
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5AJ4|1|AA|G|306
5AJ4|1|AA|A|307
5AJ4|1|AA|A|308
5AJ4|1|AA|A|309
5AJ4|1|AA|A|310
5AJ4|1|AA|A|311
5AJ4|1|AA|A|312
5AJ4|1|AA|A|313
5AJ4|1|AA|A|314
5AJ4|1|AA|U|315
5AJ4|1|AA|C|316
5AJ4|1|AA|A|317
5AJ4|1|AA|C|318
5AJ4|1|AA|A|319
5AJ4|1|AA|A|320
5AJ4|1|AA|U|321
*
5AJ4|1|AA|A|389
5AJ4|1|AA|A|390
5AJ4|1|AA|U|391
5AJ4|1|AA|A|392
5AJ4|1|AA|A|393
5AJ4|1|AA|U|394
5AJ4|1|AA|C|395
5AJ4|1|AA|C|396
Current chains
- Chain AA
- MITORIBOSOMAL 12S Ribosomal RNA
Nearby chains
- Chain AF
- MITORIBOSOMAL PROTEIN BS6M, MRPS6
- Chain AL
- MITORIBOSOMAL PROTEIN US12M, MRPS12
- Chain AO
- MITORIBOSOMAL PROTEIN US15M, MRPS15
- Chain AQ
- MITORIBOSOMAL PROTEIN US17M, MRPS17
- Chain AR
- MITORIBOSOMAL PROTEIN BS18M, MRPS18C
- Chain Ac
- MITORIBOSOMAL PROTEIN MS25, MRPS25
- Chain Am
- MITORIBOSOMAL PROTEIN MS37, MRPS37
Coloring options: