IL_5AJ4_110

3D structure

PDB id

5AJ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 55S mammalian mitoribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

AUAAAAAUA*UAUUCAAU

Length

17 nucleotides

Bulged bases

5AJ4|1|AA|A|877

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5AJ4|1|AA|A|873
5AJ4|1|AA|U|874
5AJ4|1|AA|A|875
5AJ4|1|AA|A|876
5AJ4|1|AA|A|877
5AJ4|1|AA|A|878
5AJ4|1|AA|A|879
5AJ4|1|AA|U|880
5AJ4|1|AA|A|881
*
5AJ4|1|AA|U|887
5AJ4|1|AA|A|888
5AJ4|1|AA|U|889
5AJ4|1|AA|U|890
5AJ4|1|AA|C|891
5AJ4|1|AA|A|892
5AJ4|1|AA|A|893
5AJ4|1|AA|U|894

Current chains

Chain AA

MITORIBOSOMAL 12S Ribosomal RNA

Nearby chains

Chain AO

MITORIBOSOMAL PROTEIN US15M, MRPS15

Chain Ae

MITORIBOSOMAL PROTEIN MS27, MRPS27

Chain Aj

MITORIBOSOMAL PROTEIN MS34, MRPS34

Chain BT

MITORIBOSOMAL PROTEIN BL19M, MRPL19