IL_5APO_017
3D structure
- PDB id
- 5APO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and C-terminally tagged Rei1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.41 Å
Loop
- Sequence
- CAGACGGG*CAUAAUG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5APO|1|5|C|435||||P_1
5APO|1|5|A|436||||P_1
5APO|1|5|G|437||||P_1
5APO|1|5|A|438||||P_1
5APO|1|5|C|439||||P_1
5APO|1|5|G|493||||P_1
5APO|1|5|G|494||||P_1
5APO|1|5|G|495||||P_1
*
5APO|1|5|C|618||||P_1
5APO|1|5|A|619||||P_1
5APO|1|5|U|620||||P_1
5APO|1|5|A|621||||P_1
5APO|1|5|A|622||||P_1
5APO|1|5|U|623||||P_1
5APO|1|5|G|624||||P_1
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain E
- 60S RIBOSOMAL PROTEIN EL6
- Chain P
- 60S ribosomal protein L17-A
- Chain e
- 60S ribosomal protein L32
- Chain f
- 60S ribosomal protein L33-A
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